Rice Trait Ontology

ID	NAME	DEFINITION	IS_A
TO:0000618	crushed grain percentage	"The percentage of cracked dehulled grain with at least one fourth of the size still intact." [Gramene:pankaj_jaiswal]	TO:0000162 ! grain quality trait
TO:0000619	vivipary	"A phenomenon associated to the seeds that germinate before becoming detached or harvested from the parent plant. Thus the germination occurs before the seed undergoes dormancy." [Gramene:pankaj_jaiswal]	TO:0000653 ! seed growth and development trait
TO:0000620	plant embryo development trait	"A whole plant growth and development trait (TO:0000947) that is a quality of a plant embryo development stage (PO:0007631)." [Gramene:pankaj_jaiswal, TO:cooperl]	TO:0000947 ! whole plant growth and development trait
TO:0000621	inflorescence development trait	"Traits associated with observing effects on the development of the inflorescence and its parts." [Gramene:pankaj_jaiswal]	TO:0000283 ! biological process traitTO:0000654 ! shoot system growth and development trait
TO:0000622	flower development trait	"Traits associated with observing effects on the development of the flower and its parts." [Gramene:pankaj_jaiswal]	TO:0000621 ! inflorescence development trait
TO:0000623	involucre bristle length	"An inflorescence bristle length trait (TO:0000643) that is the length of the bristles found on an involucre (PO:0009100)." [Gramene:pankaj_jaiswal, TO:cooperl]	TO:0000979 ! involucre morphology traitTO:0000271 ! inflorescence lengthTO:0000643 ! inflorescence bristle length
TO:0000624	allelopathic effect	"This is an assay of any direct or indirect, harmful or beneficial effect of one plant on another through the production of chemical compounds (allelochemicals) that escape in the environment." [Gramene:pankaj_jaiswal]	TO:0000347 ! weed damage
TO:0000625	spikelet density	"A spikelet morphology trait (TO:0000657) which is the density of a spikelet (PO:0009051) in the inflorescence (PO:0009049) or on the given inflorescence branch (PO:0009081) order." [Gramene:pankaj_jaiswal, PO:0009049, PO:0009051, PO:0009081, TO:moorel]	TO:0000657 ! spikelet morphology traitWTO:0000044 ! morphologyTO:0000800 ! inflorescence density
TO:0000626	relative phosphorus distribution between shoot and root	None	TO:0001024 ! phosphorus content
TO:0000627	relative phosphorus utilization efficiency	None	TO:0000102 ! phosphorus sensitivity
TO:0000628	pearl millet downy mildew resistance	"Causal agent	TO:0000439 ! fungal disease resistance
TO:0000629	days to tassel	"It is determined as the number of days from the seed sowing to the stage when either the pollen shedding or anther exsertion occurs on the maize tassel." [Gramene:pankaj_jaiswal]	TO:0000365 ! male floweringTO:0000344 ! days to flowering trait
TO:0000630	pedicel length	"Length of the pedicel." [Gramene:pankaj_jaiswal]	TO:0000641 ! inflorescence primary branch length
TO:0000631	green plantlet differentiation frequency	None	TO:0000243 ! in vitro regeneration ability
TO:0000632	green plantlet yield frequency	None	TO:0000243 ! in vitro regeneration ability
TO:0000633	relative total dry weight	None	TO:0000352 ! plant dry weight
TO:0000634	stem node number	"A stem morphology trait (TO:0000361) which is the number of stem nodes (PO:0020141)." [Gramene:pankaj_jaiswal]	TO:0000754 ! cardinal organ part morphology traitTO:0000953 ! stem number
TO:0000635	popping expansion volume	None	TO:0001069 ! cooking quality trait
TO:0000636	relative shoot dry weight	None	TO:0000552 ! shoot dry weight
TO:0000638	spike width	None	TO:0000804 ! inflorescence width