RiceTraitOntology
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Rice Trait Ontology
ID
NAME
DEFINITION
IS_A
TO:0002742
fruit volume
"A fruit morphology trait (TO:0002629) which is the volume of the fruit (PO:0002629)." [Gramene:pankaj_jaiswal, PO:0002629]
TO:0002625 ! fruit size
TO:0002743
dehulled grain volume
"A grain volume (TO:0001108) which is the volume of a dehulled grain." [Gramene:pankaj_jaiswal, TO:moorel]
TO:0000397 ! grain sizeTO:0001108 ! grain volumeTO:0002742 ! fruit volume
TO:0002744
fruit curved length
"A fruit length (TO:0002626) which is the average length of the curved surface of fruit (PO:0009001)." [Gramene:pankaj_jaiswal, PO:0009001, TO:moorel]
TO:0002626 ! fruit length
TO:0002745
grain curved length
"A grain length (TO:0000734) which is the curved surface of grain without hull (dehulled)." [Gramene:pankaj_jaiswal, TO:moorel]
TO:0000734 ! grain length
TO:0002746
fruit weight
"A fruit morphology trait (TO:0002629) that is the weight of a fruit (PO:0009001)." [Gramene:pankaj_jaiswal, TO:cooperl]
TO:0002629 ! fruit morphology trait
TO:0002747
10-dehulled grain weight
"A dehulled grain weight (TO:0000590) which is the weight of a sample of 10 dehulled grains (caryopsis fruit; PO:0030104)." [Gramene:pankaj_jaiswal] {comment="TO:cooperl"}
TO:0000590 ! dehulled grain weight
TO:0002748
ligule morphology trait
"A vascular leaf morphology trait (TO:0000419) which is a quality of a ligule (PO:0020105)." [Gramene:pankaj_jaiswal, PO:0020105, TO:cooperl]
TO:0000754 ! cardinal organ part morphology traitTO:0000419 ! vascular leaf morphology trait
TO:0002749
ligule pubescence
"A ligule morphology trait (TO:0002748) which is the extent of pubescence (presence of hairs) on the ligule (PO:0020105)." [Gramene:pankaj_jaiswal, PO:0020105, TO:cooperl]
TO:0002748 ! ligule morphology trait
TO:0002750
ligule margin pubescence
"A ligule morphology trait (TO:0002748) which isthe extent of pubescence (presence of hairs) on the margin of a ligule (PO:0020105)." [Gramene:pankaj_jaiswal, PO:0020105, TO:cooperl]
TO:0002748 ! ligule morphology trait
TO:0002751
inflorescence branch arrangement
"An inflorescence morphology trait (TO:0000373) which is the arrangement of inflorescence branches (PO:0009081)." [Gramene:pankaj_jaiswal, PO:0009081, TO:moorel]
TO:0000050 ! inflorescence branching
TO:0002753
arrangement of inflorescence primary branch
"An inflorescence branch arrangement (TO:0002751) trait which is the arrangement of primary branches in an inflorescence (PO:0009049)." [Gramene:pankaj_jaiswal, PO:0009049, TO:moorel]
TO:0002751 ! inflorescence branch arrangement
TO:0002754
inflorescence axis texture
"An inflorescence axis morphology trait (TO:0000782) which is the texture of an inflorescence axis (PO:0020122)." [Gramene:pankaj_jaiswal, PO:0020122, TO:cooperl]
TO:0000782 ! inflorescence axis morphology trait
TO:0002755
cell organelle development trait
"Trait(s) associated with phenotypes observed for abnormal development of cell organelle structure and its biogenesis." [Gramene:pankaj_jaiswal]
TO:0002686 ! cell growth and development trait
TO:0002756
shoot growth angle
"Estimated by the angle of inclination of the main shoot/stem against the soil/growth medium surface." [Gramene:pankaj_jaiswal]
WTO:0000011 ! developmentTO:0000398 ! whole plant morphology trait
TO:0002757
flag leaf length
"A flag leaf morphology trait (TO:0000832) which is the length of the flag leaf (PO:0020103)." [Gramene:pankaj_jaiswal, PO:0020103, TO:moorel]
TO:0000135 ! leaf lengthTO:0000832 ! flag leaf morphology trait
TO:0002758
flag leaf lamina width
"Actual measurements, in centimeters of the widest portion of the flag leaf lamina." [Gramene:pankaj_jaiswal]
TO:0002720 ! leaf lamina width
TO:0002759
grain number
"A fruit number trait (TO:0000894) which is the number of grains (caryopsis fruit; PO:0030104) in an infructescence (PO:0006342)." [Gramene:pankaj_jaiswal, PO:0006342, PO:0030104, TO:moorel] {comment="TO:cooperl"}
TO:0000894 ! fruit number traitTO:0001079 ! caryopsis fruit morphology trait
TO:0002761
length of grain with hull
"A grain length (TO:0000734) with hull." [Gramene:pankaj_jaiswal]
TO:0000734 ! grain length
TO:0002762
hulled grain width
"A grain width (TO:0000975) with caryopsis hull (PO:0006000)." [Gramene:pankaj_jaiswal, TO:moorel]
TO:0000975 ! grain width
TO:0002763
curved length of grain with hull
"Average length of the curved surface of grain with hull (hulled)." [Gramene:pankaj_jaiswal]
TO:0002745 ! grain curved length
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