PheSeq, A Bayesian Deep Learning Model to Enhance and Interpret the Gene Disease Association Studies

An evidence-augmented data fusion is run to support the driver gene discovery via interpretable literature evidence and omics data. Case studies in Alzheimer's disease, Lung cancer and Breast cancer.

Gene-HPO Pathology Network for Lung Cancer

Gene Type Gene Count Number of related HPO Number of literature evidences
Reported genes by literature 30 16 71
Reported genes by both 6 5 11
Reported genes by GWAS 7 6 12