AD-Alterome is a comprehensive database featuring AD-specific biomarker regulatory events, meticulously mined from scientific literature. Our platform is designed to enhance the investigation of Alzheimer's Disease (AD) pathology, offering a rich, accurate, and specific resource for researchers.
Our approach involves using specially designed templates to identify AD-specific biomarker regulatory events from literature. This ensures the extraction of high-quality, precise information relevant to AD pathology.
The AD-Alterome database is a specialized repository for AD, providing a centralized location for researchers to access and explore relevant data. This database supports efficient data retrieval, evidence display, and results visualization.
Researchers can quickly search for biomarker regulatory event descriptions associated with genes of interest. Each event is backed by literature support, facilitating targeted research.
Utilizing a specific recommendation algorithm, this module accelerates the prioritization of AD-specific gene-phenotype associations. It also provides the necessary evidence to support these associations, streamlining the research process.
Based on the hypergeometric test algorithm, this feature allows for the investigation of AD-specific gene function enrichment. It reveals potential functional associations, aiding in the understanding of AD pathology.
All data pages include interactive visualizations, making it easier for researchers to interpret complex data.
Each piece of data is supported by clear, concise references to the original literature, ensuring the reliability and validity of the information provided.
AD-Alterome serves as a valuable data resource and effective tool for gene- and phenotype-centered exploration of AD pathology, offering researchers the means to uncover deeper insights into Alzheimer's Disease mechanisms.
[1] Xinzhi Yao, Zhihan He, Yuxing Wang, Anastasios Nentidis, Ziming Tang, Georgios Katsimpras, Xuan Xu, Xiangyu Meng, Jin-Dong Kim, Jinchen Li, Leiyu Feng, Yuan Quan, George Paliouras, Jingbo Xia. "AD-Alterome: A Resource of Literature-mined Pathology Investigation for Alzheimer’s Disease."
In Preparation
HZAU BioNLP Lab
Affiliation: College of Informatics, Huazhong Agricultural UniversityChina, Wuhan, Hubei, China
Main Developer: Xinzhi Yao Email: xinzhi_bioinfo@163.com
Lab PI: Jingbo Xia